| Protein ID: 159046512 |
 T4SS name [ID] | VirB [469] |
| Gene symbol | - |
| Locus tag | Dshi_3973 |
| Strain | Dinoroseobacter shibae DFL 12 |
| Replicon | plasmid pDSHI03 [GenBank: NC_009957] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 33535..34149 [+] |
| Product | lytic transglycosylase |
| Component type | VirB1 |
| UniProt ID | A8LTZ3 |
| KEGG ID | dsh:Dshi_3973 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 204 a.a. [Download] |
| >gi|159046512|ref|YP_001542182.1| lytic transglycosylase [Dinoroseobacter shibae DFL 12] MVLVMESDGSLTPSRSQNSFARNYNDGIGQGSAADGLAILGETDLGPDEVQVAALARPAPLPRAEVLNAI EATALRYAGHPALRRADLSVRDWLTLYRANIEVESAYRQDAVSSAGAIGLGQLMPATARDLGVDPRDPLQ NLDGSARYLAMMLNTFGDPRLALAAYNAGPDAVRQYGGIPPYRETQNHVARVMAVVARLEGSNS |
| Nucleotide Sequence: 615 bp [Download] |
| >gi|159046469|ref|NC_009957.1|:33535-34149 Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence ATGGTGCTGGTCATGGAGAGCGATGGCTCTCTGACCCCGTCCCGCTCCCAGAACAGCTTTGCCCGCAATT ACAATGATGGCATTGGACAGGGGTCGGCGGCTGATGGGCTGGCGATACTCGGTGAGACTGACCTTGGGCC AGACGAAGTTCAGGTTGCTGCCCTTGCGCGGCCTGCTCCCCTACCCCGCGCTGAAGTTCTAAATGCCATA GAAGCCACCGCCCTTCGCTATGCCGGGCACCCTGCGCTGCGCCGCGCAGACCTCTCGGTTCGTGATTGGC TGACGCTCTACCGTGCCAATATCGAAGTCGAGAGCGCCTATCGGCAGGATGCGGTCTCGAGTGCTGGCGC CATTGGCCTTGGTCAATTGATGCCCGCGACGGCGCGCGATCTTGGCGTCGATCCGCGTGATCCCCTTCAA AACCTCGACGGCTCCGCCCGCTATCTTGCGATGATGCTGAACACGTTTGGCGATCCGCGTCTTGCCCTCG CGGCCTACAACGCCGGGCCGGACGCTGTGCGCCAGTACGGCGGCATTCCCCCCTACAGAGAAACCCAGAA CCACGTGGCCCGTGTCATGGCCGTCGTGGCCCGATTGGAAGGATCAAATTCATGA |
| Protein ID: 159046517 |
| T4SS name [ID] | VirB [469] |
| Gene symbol | - |
| Locus tag | Dshi_3978 |
| Strain | Dinoroseobacter shibae DFL 12 |
| Replicon | plasmid pDSHI03 [GenBank: NC_009957] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 37217..38371 [+] |
| Product | lytic transglycosylase catalytic |
| Component type | VirB1 |
| UniProt ID | A8LTZ8 |
| KEGG ID | dsh:Dshi_3978 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 384 a.a. [Download] |
| >gi|159046517|ref|YP_001542187.1| lytic transglycosylase catalytic [Dinoroseobacter shibae DFL 12] MTSSLPHILAFCLLPGLGFAQGVPTNDSGLTARDIVETGDRETDLAIQADKLAVRELIAEIEREQLETLR RILDAQTSFGGQGLPAMVSGLESGSGNPDRAVEAVYGTGEIDPNPGGAQMFGDASETIEQLIIRVAQETS GFAGVGRAGLSPVQWRALLQALIWQESRFTIGARSPVGAYGLTQIMPGTASDLGINPEYYDSPYLQVHGG ARYLATQLNTFDGNIINALAAYNAGPGRVFEYGGVPPFRETQHYVSVIPERYNLYLTRIGGIEALGTIDP TLLANANLSLTGHGAAFYGSNSPAAIRQAALRIRDIVERISETEDVQESIALNTYARAELVRLVAARIRL QAARTRVLSAEELAQASARMAEGTFMEFTIREID |
| Nucleotide Sequence: 1155 bp [Download] |
| >gi|159046469|ref|NC_009957.1|:37217-38371 Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence TTGACGTCTAGCCTGCCTCATATCCTCGCGTTTTGCCTGCTGCCCGGTCTCGGCTTCGCCCAAGGTGTGC CGACCAATGACAGTGGGCTGACCGCGCGTGACATCGTCGAGACCGGGGATCGAGAGACAGACCTTGCCAT CCAGGCCGACAAACTTGCAGTGCGCGAACTCATCGCCGAGATCGAACGGGAGCAGCTGGAAACCCTCCGA CGCATCCTCGATGCCCAGACCAGCTTCGGCGGTCAGGGCCTGCCCGCCATGGTCTCGGGGCTGGAAAGCG GCAGCGGCAATCCCGACCGCGCCGTGGAAGCCGTCTATGGCACGGGCGAGATAGATCCCAATCCCGGCGG TGCGCAGATGTTCGGCGACGCGTCCGAGACCATCGAGCAGCTCATCATCCGCGTCGCCCAGGAAACCAGC GGCTTTGCGGGAGTTGGCCGCGCAGGGCTCTCACCCGTCCAGTGGCGAGCGCTTCTACAGGCCCTCATCT GGCAGGAAAGCCGGTTTACGATTGGGGCACGGTCTCCCGTTGGCGCCTATGGTCTCACCCAGATCATGCC GGGCACCGCCAGCGATCTCGGCATCAATCCGGAATATTACGACAGCCCCTATCTGCAGGTGCATGGTGGC GCGCGCTATCTCGCGACCCAGCTCAACACATTCGATGGCAACATCATCAACGCCCTCGCGGCCTATAACG CCGGACCCGGCCGGGTTTTCGAGTATGGCGGCGTGCCACCCTTCCGCGAGACCCAGCACTACGTGTCGGT CATCCCTGAACGCTACAATCTCTATCTGACCCGTATCGGCGGGATCGAAGCGCTTGGCACGATCGACCCC ACGCTTCTCGCCAATGCCAACCTCTCGCTCACGGGTCATGGGGCGGCCTTTTATGGCAGCAACTCACCAG CCGCGATCCGCCAAGCCGCCCTGCGCATCCGCGATATCGTCGAACGGATTTCCGAGACTGAAGACGTGCA GGAAAGCATCGCACTCAACACCTATGCCCGCGCCGAACTCGTGCGCCTCGTCGCTGCCCGCATCCGGCTT CAGGCGGCGCGCACCCGCGTCCTTTCCGCCGAAGAGCTGGCCCAGGCCAGTGCGCGTATGGCCGAAGGCA CGTTCATGGAATTCACGATCAGGGAGATAGACTGA |